BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014D06LP1|AL426679
(802 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1257 1582 0.0
>3x_Contig1257
Length = 4889
Score = 1582 bits (798), Expect = 0.0
Identities = 801/802 (99%)
Strand = Plus / Plus
Query: 1 atctatttcctataaaatcttctcctgtttgttgattataatagttcaaatgggcatgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 atctatttcctataaaatcttctcctgtttgttgattataatagttcaaatgggcatgtt 833
Query: 61 atctaagatcaaaagagacaagataacatctggtaaattgagtacattaatgaagtacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 atctaagatcaaaagagacaagataacatctggtaaattgagtacattaatgaagtacta 893
Query: 121 tgataagctaatgactcatatttggatcaatccgtacttcaattcgagaaatacttccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 tgataagctaatgactcatatttggatcaatccgtacttcaattcgagaaatacttccat 953
Query: 181 tcaggttttacaatgtctttcgatgctattattttatatgctaaatgttggagacatttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 tcaggttttacaatgtctttcgatgctattattttatatgctaaatgttggagacatttc 1013
Query: 241 ttccatttacgaacttcgtggaaaagttgtttcaatgtcacaacaactaaggttacacag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 ttccatttacgaacttcgtggaaaagttgtttcaatgtcacaacaactaaggttacacag 1073
Query: 301 gtgtcctagtgctgtactaggtggtgatggttccactgtctccaaagtacagcaaggtga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1074 gtgtcctagtgctgtactaggtggtgatggttccactgtctccaaagtacagcaaggtga 1133
Query: 361 aagacgtatcctcttctggagtatttattacttggatgtgtttagtgctcttcaacttgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1134 aagacgtatcctcttctggagtatttattacttggatgtgtttagtgctcttcaacttgg 1193
Query: 421 tgtcccgaggttgctcaaagactttgaaattgaatgcgctctgccagttactagtgacga 480
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1194 tgtcccgaggttgctcaaagactttgaaattgaatgcgctctgccagtaactagtgacga 1253
Query: 481 cgacagacaggtcaatttggcgggccaaatgatcgcattagaaggtaaagtgtctcagtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1254 cgacagacaggtcaatttggcgggccaaatgatcgcattagaaggtaaagtgtctcagtt 1313
Query: 541 ttctttgtctgtgataagatttgccaaagttatggggaatattttagattcaacgttcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1314 ttctttgtctgtgataagatttgccaaagttatggggaatattttagattcaacgttcaa 1373
Query: 601 gagaggcatgactacatcactgactaaacaagcagctttggtgcatgagaacgcccttga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1374 gagaggcatgactacatcactgactaaacaagcagctttggtgcatgagaacgcccttga 1433
Query: 661 taattggagacatggtttacagaaagatctctttttccaattagatgttaatggcacgat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1434 taattggagacatggtttacagaaagatctctttttccaattagatgttaatggcacgat 1493
Query: 721 taatatggacgaattcaatcaacaaaagcaatactctaaatcactttcaccacgcactgc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1494 taatatggacgaattcaatcaacaaaagcaatactctaaatcactttcaccacgcactgc 1553
Query: 781 cgcttttactcacaattccttg 802
||||||||||||||||||||||
Sbjct: 1554 cgcttttactcacaattccttg 1575
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6219
Number of Sequences: 1807
Number of extensions: 6219
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 802
length of database: 10,358,551
effective HSP length: 16
effective length of query: 786
effective length of database: 10,329,639
effective search space: 8119096254
effective search space used: 8119096254
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)